Eiji ARAMAKI

Eiji ARAMAKI

Eiji ARAMAKI, Ph.D.

Associate Professor

NAIST (Nara Institute of Science and Technology)

e-mail: aramaki@is.naist.jp

Eiji ARAMAKI is an associate professor at NAIST (Nara Institute of Science and Technology), Japan, working on information science. He got his Ph.D degree from the University of Tokyo in 2005. After his PhD has worked in medical informatics at the University of Tokyo, Japan. Since 2013, he has been an associate professor in computer science at Kyoto University. His current research interests are in natural language processing (NLP) for the medical field. He is also one of chairs of medical NLP shared task (MedNLP) of NTCIR.

Dissertation

  1. Ph.D. University of Tokyo, 2005.
  2. M.S. Kyoto University, 2002.
  3. B.S. Kyoto University, 2000.
  4. 2005/04-2008/03 The University of Tokyo Hospital, Assistant professor
  5. 2008/04-2013/03 Center of Knowledge Structuring, The University of Tokyo, Lector
  6. 2013/04- C-PIER, Kyoto University, Associate professor

Research Interest

  1. Natural Language Processing (Machine Translation)
  2. Medical Informatics (Natural Language Processing in Medical)

BOOK: Chapter Writing

  1. Eiji Aramaki, Sadao Kurohashi, Hideki Kashioka, Hideki Tanaka: Example-based Machine Translation without Saying Inferable Predicate, Natural Language Processing - IJCNLP 2004: First International Joint Conference Revised Selected Papers (Lecture Notes in Computer Science), No., pp.206-215, Springer, 2004.
  2. Hideo Watanabe, Sadao Kurohashi, Eiji Aramaki: Chapter 14: Finding Translation Patterns From Paired Source and Target Dependency Structures, Recent Advances in Example-based Machine Translation, Kluwer Academic Publishers, 2003 (citation count: 20).

Participation on Conference and Journal Committees

  1. The 5th International Symposium on Languages in Biology and Medicine (LBM 2013), Programming Committee.
  2. The 6th International Joint Conference on Natural Language Processing - System Demonstrations (IJCNLP2013), Programming Committee.
  3. The 6th International Joint Conference on Natural Language Processing - the NLP for Medical Applications area of IJCNLP (IJCNLP2013), Programming Committee.
  4. Workshop on Language Processing and Crisis Information (IJCNLP2013 Workshop), Programming Committee.
  5. The First Workshop on Natural Language Processing for Medical and Healthcare Fields (IJCNLP2013 Workshop), Chair.
  6. The Workshop on BioNLP 2013, Programming Committee.
  7. AAAI 2013 Spring Symposium, Theme Session Programming Committee.
  8. The Conference on Empirical Methods in Natural Language Processing and Conference on Computational Natural Language Learning (EMNLP-CoNLL2012), Programming Committee (area of Semantics).
  9. ICPR (International Conference on Pattern Recognition) Workshop on Pattern Recognition for Healthcare Analytics, Programming Committee.
  10. The European Chapter of the Association for Computational Linguistics (EACL2012), Programming Committee (area of NLP Application).
  11. AAAI 2012 Spring Symposium, Theme Session Programming Committee.

Journal

  1. Kayo Waki, Hideo Fujita, Yuji Uchimura, Eiji Aramaki, Koji Omae, Takeshi Kadowaki, Kazuhiko Ohe, DialBetics: Smartphone-based self-management for type 2 diabetes patients, Journal of Diabetes Science and Technology, Vol. 6, No. 4, pp. 983–985, July 2012.
  2. Akiyo Nadamoto, Eiji Aramaki, Takeshi Abekawa, Yohei Murakami, Exacting content holes by comparing community-type content with Wikipedia, International Journal of Web Information Systems, Vol. 6 Iss: 3, pp.248 - 260. 2010. (Outstanding Paper Award Winner).
  3. Emiko Yamada Eiji Aramaki, Takeshi Imai, Kazuhiko Ohe: The Internal Structure of a Disease Name and its Application for ICD Coding, Stud Health Technol Inform. 2010, pp.1010-1014, 2010. [PPT]
  4. Eiji Aramaki, Yasuhide Miura, Masatsugu Tonoike, Tomoko Ohkuma, Hiroshi Mashuichi, Kayo Waki, Kazuhiko Ohe: Extraction of Adverse Drug Effects from Clinical Records, Stud Health Technol Inform. 2010, pp.739-743, 2010. [PDF] [PPT]
  5. Takeshi Imai, Eiji Aramaki, Masayuki Kajino, Kengo Miyo, Yuzo Onogi, Kazuhiko Ohe: Finding Malignant Findings from Radiological Reports using Medical Attributes and Syntactic Information, Stud Health Technol Inform. 2007., Vol.129, pp.540-544, 2007.
  6. Eiji Aramaki, Takeshi Imai, Masayuki Kajino, Kengo Miyo, Kazuhiko Ohe: A Statistical Selector of the Best among Multiple ICD-coding Methods, Stud Health Technol Inform. 2007, Vol.129, pp.645-649, 2007. (Nominated as the best paper) [PDF]

Conference and Workshop

  1. Yasuhide Miura, Tomoko Ohkuma, Hiroshi Masuichi, Emiko Yamada Shinohara, Eiji Aramaki and Kazuhiko Ohe: Incorporating Knowledge Resources to Enhance Medical Information Extraction, IJCNLP2013 the First Workshop on Natural Language Processing for Medical and Healthcare Fields, 2013 (2013/10/18, Nagoya, Japan).
  2. Takashi Okumura, Eiji ARAMAKI and Yuka Tateisi: Clinical vocabulary and Clinical finding concepts, IJCNLP2013 the First Workshop on Natural Language Processing for Medical and Healthcare Fields, 2013 (2013/10/18, Nagoya, Japan).
  3. Wailok Tam, Koiti Hasida, Yusuke Matsubara, Eiji Aramaki, Mai Miyabe, Motoyuki Takaai, Hirosi Uozaki and Yo Sato: Proper and Efficient Treatment of Anaphora and Long-Distance Dependency in Context-Free Grammar, IJCNLP2013 the First Workshop on Natural Language Processing for Medical and Healthcare Fields, 2013 (2013/10/18, Nagoya, Japan).
  4. Hideki Asoh, Masanori Shiro, Shotaro Akaho, Toshihiro Kamishima, Koiti Hasida, Eiji Aramaki, Takahide Kohro: Applying inverse reinforcement learning to medical records of diabetes, ECML-PKDD2013 Workshop on Reinforcement Learning with Generalized Feedback
  5. Eiji Aramaki, Sachiko Maskawa, Mai Miyabe, Mizuki Morita and Sachi Yasuda: A Word in a Dictionary is used by Numerous Users, International Joint Conference on Natural Language Processing (IJCNLP2013), 2013 (2013/10/18, Nagoya, Japan).
  6. Hideki Asoh, Masanori Shiro, Shotaro Akaho, Toshihiro Kamishima, Koiti Hasida, Eiji Aramaki, Takahide Kohro: Modeling Medical Records of Diabetes using Markov Decision Processes, ICML2013 Workshop on Role of Machine Learning in Transforming Healthcare.(2013/07/16, Atlanta, USA)
  7. Yasuhide Miura, Tomoko Ohkuma, Hiroshi Masuichi, Emiko YamadaShinohara, Eiji Aramaki,Kazuhiko Ohe: UT-FX at NTCIR-10 MedNLP: Incorporating Medical Knowledge to Enhance Medical Information Extraction, In Proceedings of NTCIR-10, 2013. (2013/06/18, Tokyo, Japan) (The best system at the task 2 among 22 systems from 12 Groups)
  8. Mizuki MORITA, Yoshinobu KANO, Tomoko OHKUMA, Mai MIYABE, Eiji ARAMAKI: Overview of the NTCIR-10 MedNLP task, In Proceedings of NTCIR-10, 2013. (2013/06/18, Tokyo, Japan) (citation count: 10)
  9. Hiroto Imachi, Mizuki Morita, Eiji Aramaki: NTCIR10 MedNLP Baseline System, In Proceedings of NTCIR-10, 2013. (2013/06/18, Tokyo, Japan)
  10. Mizuki Morita, Soichi Ogishima, Kunihiro Nishimura, Eiji Aramaki, Tateo Ito: Online population-based patient registry to collect and share health-related data of rare disease patients, AAAI 2012 Spring Symposium on Data Driven Wellness: From Self-Tracking to Behavior Change, 2012.
  11. Eiji Aramaki, Satoshi Miura, Sachi Yasuda, Mai Miyabe, Masaki Murata: Which is Stronger? : Discriminative Learning of Sound Symbolism, CogSci (Poster Presentation), 2012.
  12. Sachi Yasuda, Masashi Okamoto Eiji Aramaki: Ad hoc creature: Lost and added in translation from description to depiction, CogSci (Poster Presentation), 2012.
  13. Sachi Yasuda, Masashi Okamoto Eiji Aramaki: Mind the Gap between Text and Real World: A Corpus-based Study on the Prototype Effects of Animal Body Parts, 4th UK Cognitive Linguistics Conference (UKCLC4), 2012.
  14. Eiji Aramaki, Sachiko MASKAWA, Mizuki MORITA: Influenza Patients are invisible in the web, AAAI Spring Symposium 2012.
  15. Eiji Aramaki, Mai Miyabe, Kayo Waki, Hideo Fujita, Yuji Uchimura, Koji Omae, Masayo Hayakawa, Takashi Kadowaki, Kazuhiko Ohe: Smartphone-based Self Management System for Type-2 Diabetes Patients, AAAI Spring Symposium 2012.
  16. Mai Miyabe, Eiji Aramaki, Asako Miura: Use Trend Analysis of Twitter after the Great East Japan Earthquake, Conference on computer-supported cooperative work (CSCW), 2012 (Poster Presentation).
  17. Eiji Aramaki, Sachiko Maskawa and Mizuki Morita: Twitter Catches The Flu: Detecting Influenza Epidemics using Twitter, Conference on Empirical Methods in Natural Language Processing (EMNLP), 2011 (oral presentation acceptance ratio is 15.1%) (citation count: 38).
  18. K. Waki, E. Aramaki, Y. Uchimura, S. Okahata, S. Masukawa, K. Omae, M. Hayakawa, H. Fujita, T. Kadowaki, K. Ohe: Dialbetics: A Novel Smartphone-Based Self-Management Support System for Type 2 Diabetic Patients, The 4th International Conference on Advanced Technologies & Treatments for Diabetes (ATTD), 2011.
  19. Akiyo Nadamoto, Eiji Aramaki, Takeshi Abekawa, Yohei Murakami:Extracting the Gist of Social Network Services Using Wikipedia, the 12th International Conference on Information Integration and Web-based Applications & Services (iiWAS2010), 2010.
  20. Masahiro Kojima, Masaki Murata, Junichi Kazama, Kou Kuroda, Atsushi Fujita, Eiji Aramaki, Masaaki Tsujida, Yashuhiko Watanabe, Kentaro Torisawa: Using Various Features in Machine Learning to Obtain High Levels of Performance for Recognition of Japanese Notational Variants, PACLIC 24, 2010.
  21. Yasuhide Miura, Eiji Aramaki, Tomoko Ohkuma, Masatsugu Tonoike, Daigo Sugihara, Hiroshi Masuichi and Kazuhiko Ohe: Adverse-Effect Relations Extraction from Massive Clinical Records , COLING 2010 Workshop (In cooperation with Info-plosion) The Second International Workshop on NLP Challenges in the Information Explosion Era (NLPIX 2010), 2010.
  22. Akiyo Nadamoto, Eiji Aramaki, Takeshi Abekawa, Yohei Murakami: Outline of a Community-type Content based on Wikipedia, The 15th International Conference on Database Systems for Advanced Applications (DASFAA 2010), 2010.
  23. Masumi Shirakawa, Kotaro Nakayama, Eiji Aramaki, Takahiro Hara, and Shojiro Nishio: Relation Extraction between Related Concepts by Combining Wikipedia and Web Information for Japanese Language, Proceedings of Asia Information Retrieval Societies Conference (AIRS 2010), pp.310-319, 2010.
  24. Akiyo Nadamoto, Eiji Aramaki, Takeshi Abekawa, Yohei Murakami: Content Hole Search in Community-type Content Using Wikipedia, the 11th International Conference on Information Integration and Web-based Applications & Services (iiWAS2009), 2009.
  25. Eiji Aramaki, Takeshi Abekawa: Fast decoding and Easy Implementation: Transliteration as Sequential Labeling, the Association for Computational Linguistics and International Joint Conference on Natural Language Processing (ACL-IJCNLP2009) Named Entities Workshop (NEWS), pp.65-68, 2009.
  26. Eiji Aramaki, Yasuhide Miura, Masatsugu Tonoike, Tomoko Ohkuma, Hiroshi Mashuichi, Kazuhiko Ohe: TEXT2TABLE: Medical Text Summarization System Based on Named Entity Recognition and Modality Identification, Proceedings of the Human Language Technology conference and the North American chapter of the Association for Computational Linguistics (HLT-NAACL2009) Workshop on BioNLP, pp.185-192, 2009. (citation count: 18)
  27. Akiyo Nadamoto, Eiji Aramaki, Takeshi Abekawa, Yohei Murakami: A Content Hole Search in a Community-type Content, International World Wide Web Conference (WWW2009) , 2009.
  28. Akiyo Nadamoto, Eiji Aramaki, Takeshi Abekawa, Yohei Murakami: Searching for Important but Neglected Content from Community-type-content, The Fourth International Conference On Signal-Image Technology & Internet-based Systems (SITIS2008), pp.161-168, 2008.
  29. Eiji Aramaki, Takeshi Abekawa, Yohei Murakami, Akiyo Nadamoto: Discriminative Dialog Analysis Using a Massive Collection of BBS comments, International World Wide Web Conference (WWW2008) Workshop on NLP Challenges in the Information Explosion Era (NLPIX2008), 2008.
  30. Eiji Aramaki, Takeshi Imai, Kengo Miyo, Kazuhiko Ohe: Orthographic Disambiguation Incorporating Transliterated Probability, International Joint Conference on Natural Language Processing (IJCNLP2008), pp.48-55, 2008. (acceptance ratio is 28%) (citation count: 15)
  31. Eiji Aramaki, Takeshi Imai, Kengo Miyo, Kazuhiko Ohe: Support Vector Machine Based Orthographic Disambiguation, The Conference on Theoretical and Methodological Issues in Machine Translation (TMI2007), pp.21-30, 2007.
  32. Eiji Aramaki, Takeshi Imai, Kengo Miyo, Kazuhiko Ohe: UTH: Semantic Relation Classification using Physical Sizes, the Association for Computational Linguistics (ACL2007) Workshop on Semantic Evaluations (SemEval 2007), pp.464-467, 2007.
  33. Eiji Aramaki, Takeshi Imai, Kengo Miyo, Kazuhiko Ohe: Automatic Deidentification by using Sentence Features and Label Consistency, Workshop on Challenges in Natural Language Processing for Clinical Data, 2006. (citation count: 22)
  34. Eiji Aramaki, Takeshi Imai, Kengo Miyo, Kazuhiko Ohe: Patient Status Classification by using Rule based Sentence Extraction and BM25-kNN based Classifier, Workshop on Challenges in Natural Language Processing for Clinical Data, 2006.
  35. Eiji Aramaki, Takeshi Imai, Masayo Kashiwagi, Masayuki Kajino, Kengo Miyo, Kazuhiko Ohe: Toward Medical Ontology via Natural Language Processing, International Joint Conference on Natural Language Processing (IJCNLP2005) workshop OntoLex2005, pp.53-58, 2005.
  36. Eiji Aramaki, Sadao Kurohashi, Hideki Kashioka, Hideki Tanaka: Probabilistic Model for Example-based Machine Translation, MT Summit X, pp.219-226, 2005. (citation count: 16)
  37. Eiji Aramaki, Sadao Kurohashi: Example-based Machine Translation using Structural Translation Examples, International Workshop on Spoken Language Translation (IWSLT2004), pp.91-94, 2004. (citation count: 12)
  38. Eiji Aramaki, Sadao Kurohashi, Hideki Kashioka, Hideki Tanaka: Example-based Machine Translation without Saying Inferable Predicate, International Joint Conference on Natural Language Processing (IJCNLP2004), pp.38-45, 2004.
  39. Eiji Aramaki, Sadao Kurohashi, Hideki Kashioka, Hideki Tanaka: Word Selection for EBMT based on Monolingual Similarity and Translation Confidence, Human Language Technology conference and the North American chapter of the Association for Computational Linguistics (HLT-NAACL2003) Workshop on Building and Using Parallel Texts: Data Driven Machine Translation and Beyond, pp.57-64, 2003.
  40. Eiji Aramaki, Sadao Kurohashi, Satoshi Sato, Hideo Watanabe: Finding Translation Correspondences from Parallel Parsed Corpus for Example-based Translation, MT Summit VIII, pp.27-32, 2001. (citation count: 19)
  41. Hideo Watanabe, Sadao Kurohashi, Eiji Aramaki: Finding Structural Correspondences from Bilingual Parsed Corpus for Corpus-based Translation, International Conference on Computational Linguistics (COLING), pp.906-912, 2000. (acceptance ratio is 34%) (citation count: 81)

Awards (Only International Awards)

  1. 2011, CLIO Healthcare Awards 2011, Gold Awards
  2. 2011, Spikes Asia Advertising festival 2011, Gold Awards
  3. 2011, Emerald Literati Network 2011 Awards for Excellence, Outstanding Paper Award Winner .

Reviewer of International Journals

  1. PLOS One (2013)
  2. IEICE Transactions of BioMedicine (2012)
  3. Pharmacoepidemiology and Drug Safety (2012)
  4. Journal of Computer-Mediated Communication (2012)
  5. BMC Bioinformatics (2011)
  6. Transactions on Information Systems TOIS (2011)
  7. International Journal of Urology (2011)
  8. Computational Intelligence (2011)
  9. Applied Clinical Informatics (2010)
  10. Transactions on Audio, Speech and Language Processing (2009)
  11. IEICE Transactions on Information and Systems (2006)

© Eiji ARAMAKI. All rights reserved.

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